Package: htrSPRanalysis 0.1.3

htrSPRanalysis: Analysis of Surface Plasmon Resonance Data

Analysis of Surface Plasmon Resonance (SPR) and Biolayer Interferometry data, with automations for high-throughput SPR. This version of the package fits the 1: 1 binding model, with and without bulkshift. It offers optional local or global Rmax fitting. The user must provide a sample sheet and a Carterra output file in Carterra's current format. There is a utility function to convert from Carterra's old output format. The user may run a custom pipeline or use the provided 'Runscript', which will produce a pdf file containing fitted Rmax, ka, kd and standard errors, a plot of the sensorgram and fits, and a plot of residuals. The script will also produce a .csv file with all of the relevant parameters for each spot on the SPR chip.

Authors:Janice McCarthy Developer [aut, cre, cph], Kan Li Dev [aut], S. Moses Dennison [aut], Georgia D. Tomaras [aut]

htrSPRanalysis_0.1.3.tar.gz
htrSPRanalysis_0.1.3.zip(r-4.7)htrSPRanalysis_0.1.3.zip(r-4.6)htrSPRanalysis_0.1.3.zip(r-4.5)
htrSPRanalysis_0.1.3.tgz(r-4.6-any)htrSPRanalysis_0.1.3.tgz(r-4.5-any)
htrSPRanalysis_0.1.3.tar.gz(r-4.7-any)htrSPRanalysis_0.1.3.tar.gz(r-4.6-any)
htrSPRanalysis_0.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
htrSPRanalysis/json (API)

# Install 'htrSPRanalysis' in R:
install.packages('htrSPRanalysis', repos = c('https://janice-mccarthy.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.00 score 2 scripts 16 downloads 8 exports 50 dependencies

Last updated from:220aa4b6ef. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK134
source / vignettesOK241
linux-release-x86_64OK139
macos-release-arm64OK209
macos-oldrel-arm64OK171
windows-develOK129
windows-releaseOK76
windows-oldrelOK150
wasm-releaseOK118

Exports:%>%create_csvcreate_pdfget_fitsget_fitted_plotsget_plots_before_baselineget_rc_plotsprocess_input

Dependencies:bitbit64cellrangerclicliprcpp11crayondplyrfarverforcatsgenericsggplot2gluegridExtragtablehmsisobandlabelinglatticelifecyclemagrittrminpack.lmopenxlsxpillarpkgconfigprettyunitsprogresspurrrR6RColorBrewerRcppreadrreadxlrematchrlangS7scalesstringistringrtibbletidyrtidyselecttzdbutf8vctrsviridisLitevroomwithrzipzoo

Introduction to htrSPRanalysis

Rendered fromhtrSPRanalysis-vignette.Rmdusingknitr::knitron May 21 2026.

Last update: 2026-05-05
Started: 2024-08-27